The complimentary use of small angle x-ray scattering with crystallography in the determination of biological macromolecular structures

نویسندگان

  • John Tainer
  • Greg Hura
  • Patrick F. Suthers
  • Vinay Satish Kumar
  • Young Jung Kim
  • Costas D. Maranas
چکیده

Project_Goals: Recent advances in small angle x-ray scattering (SAXS) technique and analysis have enabled shape prediction of proteins in solution. The SAXS technique is particularly powerful in combination with partial high resolution structures. SAXS can efficiently reveal the spatial organization of protein domains, including domains missing from or disordered in known crystal structures, and establish cofactor or substrate-induced conformational changes. Following a short introduction to SAXS, examples from data collected at SIBYLS, a dual SAXS and protein crystallography synchrotron beamline, will be drawn upon to demonstrate the complimentary use of SAXS with protein crystallography. I will also describe the recent implementation of a sample loading automation tool for true high throughput SAXS data collection. Several examples of the utility of high throughput SAXS will discussed in the context of the DOE/Gtl funded program project MAGGIE (Molecular Assemblies, Genes, and Genomics Integrated Efficiently).

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Application of small angle X-ray scattering (SAXS) for differentiation between normal and cancerous breast tissues

ABSTRACT Background: Coherent scattering leads to diffraction effects and especially constructive interferences. Theseinterferences carry some information about the molecular structure of the tissue. As breast cancer isthe most widespread cancer in women, this project evaluated the application of small angleX-ray scattering (SAXS) for differentiation between normal and cancerous breast tissues....

متن کامل

Small-angle scattering studies of biological macromolecules in solution

Small-angle scattering (SAS) of x-rays and neutrons is a fundamental tool in the study of biological macromolecules. The major advantage of the method lies in its ability to provide structural information about partially or completely disordered systems. SAS allows one to study the structure of native particles in near physiological environments and to analyse structural changes in response to ...

متن کامل

Hierarchical O(N) computation of small-angle scattering profiles and their associated derivatives.

The need for fast approximate algorithms for Debye summation arises in computations performed in crystallography, small/wide-angle X-ray scattering and small-angle neutron scattering. When integrated into structure refinement protocols these algorithms can provide significant speed up over direct all-atom-to-all-atom computation. However, these protocols often employ an iterative gradient-based...

متن کامل

Study on Mechanical and microcrystalline on hybrid nanocomposites by WAXS

The aim of this work is to probe the influence of nanoclay and turmeric spends content on microcrystalline of vinyl ester hybrid nanocomposites. A series of vinyl ester hybrid nanocomposites have been fabricated with varying amounts of TS viz., 0, 2.5, 5, 7.5 and 10 % w/w along with 2% nanoclay. The microcrystalline parameters such as crystallite size and lattice strain of vinyl ester hybrid na...

متن کامل

The X-ray Transform and its Application in Nano Crystallography

In this article a review on the definition of the X- ray transform and some ofits applications in Nano crystallography is presented. We shall show that the X- raytransform is a special case of the Radon transform on homogeneous spaces when thetopological group E(n)- the Euclidean group - acts on ℝ2 transitively. First someproperties of the Radon transform are investigated then the relationship ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2008